Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 KRT18P21-201ENST00000515767 1272 ntBASIC13.31□□□□□ -0.28
FAM78BQ5VT40 VENTXP5-201ENST00000523979 775 ntBASIC13.31□□□□□ -0.28
FAM78BQ5VT40 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 STK25P1-201ENST00000585406 838 ntBASIC13.31□□□□□ -0.28
FAM78BQ5VT40 AC005332.3-201ENST00000589904 676 ntBASIC13.31□□□□□ -0.28
FAM78BQ5VT40 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM78BQ5VT40 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.3□□□□□ -0.28
FAM78BQ5VT40 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 AC122714.2-201ENST00000502787 707 ntBASIC13.3□□□□□ -0.28
FAM78BQ5VT40 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 HYMAI.1-201ENST00000620949 238 ntBASIC13.3□□□□□ -0.28
FAM78BQ5VT40 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 KRT8P10-201ENST00000450021 1447 ntBASIC13.3□□□□□ -0.28
FAM78BQ5VT40 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM78BQ5VT40 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.29□□□□□ -0.28
FAM78BQ5VT40 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.29□□□□□ -0.28
FAM78BQ5VT40 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM78BQ5VT40 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM78BQ5VT40 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM78BQ5VT40 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM78BQ5VT40 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms