Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 KRT18P1-202ENST00000452408 1331 ntBASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.15■□□□□ 0.02
LCN1P1Q5VSP4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 AC233702.3-201ENST00000578656 1387 ntBASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 AP002414.1-201ENST00000391405 1147 ntBASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 SPDYE21P-201ENST00000413323 827 ntBASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 DUX4L17-201ENST00000557360 1267 ntBASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 AP005901.3-202ENST00000581653 237 ntBASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 KRT8P49-201ENST00000604166 1432 ntBASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 MTHFR-217ENST00000641820 1569 ntBASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCN1P1Q5VSP4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 AC097637.2-201ENST00000624096 1997 ntBASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCN1P1Q5VSP4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms