Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 AC132938.5-201ENST00000624980 1813 ntBASIC13.9□□□□□ -0.18
ANKRD55Q3KP44 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.9□□□□□ -0.19
ANKRD55Q3KP44 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.9□□□□□ -0.19
ANKRD55Q3KP44 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ANKRD55Q3KP44 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ANKRD55Q3KP44 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
ANKRD55Q3KP44 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 AC003669.1-201ENST00000334569 611 ntBASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 NTF6B-201ENST00000591913 560 ntBASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 AL138831.2-201ENST00000606564 490 ntBASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ANKRD55Q3KP44 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 AC002310.6-201ENST00000624451 1377 ntBASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 AL139011.1-202ENST00000642063 584 ntBASIC13.88□□□□□ -0.19
ANKRD55Q3KP44 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms