Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PRICKLE4Q2TBC4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 AC112191.1-201ENST00000523689 701 ntBASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
PRICKLE4Q2TBC4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 AC099522.2-201ENST00000607001 744 ntBASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 AC091812.2-201ENST00000619081 385 ntBASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 AL161645.1-201ENST00000622716 1255 ntBASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PRICKLE4Q2TBC4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRICKLE4Q2TBC4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PRICKLE4Q2TBC4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRICKLE4Q2TBC4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRICKLE4Q2TBC4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.46■□□□□ 0.06
PRICKLE4Q2TBC4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 AC006449.5-201ENST00000610658 2098 ntBASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 AL662844.4-201ENST00000606367 2838 ntBASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 AC016027.1-202ENST00000607927 1699 ntBASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 OR6D1P-203ENST00000641209 4860 ntBASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRICKLE4Q2TBC4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms