Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RAE1P78406 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.79■□□□□ 0.12
RAE1P78406 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.79■□□□□ 0.12
RAE1P78406 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.79■□□□□ 0.12
RAE1P78406 POU5F1P6-201ENST00000466990 990 ntBASIC15.79■□□□□ 0.12
RAE1P78406 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 AL662844.1-201ENST00000546340 181 ntBASIC15.79■□□□□ 0.12
RAE1P78406 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.79■□□□□ 0.12
RAE1P78406 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.79■□□□□ 0.12
RAE1P78406 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
RAE1P78406 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAE1P78406 REXO1L8P-201ENST00000604378 1897 ntBASIC15.79■□□□□ 0.12
RAE1P78406 AC008741.2-201ENST00000612792 3115 ntBASIC15.79■□□□□ 0.12
RAE1P78406 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.79■□□□□ 0.12
RAE1P78406 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.79■□□□□ 0.12
RAE1P78406 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.79■□□□□ 0.12
RAE1P78406 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RAE1P78406 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAE1P78406 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAE1P78406 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
RAE1P78406 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAE1P78406 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 CRYGEP-201ENST00000412192 528 ntBASIC15.78■□□□□ 0.12
RAE1P78406 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.78■□□□□ 0.12
RAE1P78406 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 AC093909.1-201ENST00000504731 1122 ntBASIC15.78■□□□□ 0.12
RAE1P78406 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.78■□□□□ 0.12
RAE1P78406 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.78■□□□□ 0.12
RAE1P78406 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 AC020765.3-201ENST00000613051 740 ntBASIC15.78■□□□□ 0.12
RAE1P78406 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.78■□□□□ 0.12
RAE1P78406 AC010507.1-201ENST00000633895 436 ntBASIC15.78■□□□□ 0.12
RAE1P78406 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAE1P78406 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.78■□□□□ 0.12
RAE1P78406 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAE1P78406 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
RAE1P78406 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAE1P78406 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAE1P78406 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAE1P78406 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAE1P78406 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAE1P78406 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.77■□□□□ 0.12
RAE1P78406 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAE1P78406 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.77■□□□□ 0.12
RAE1P78406 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RAE1P78406 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAE1P78406 TPM4P1-201ENST00000436100 807 ntBASIC15.77■□□□□ 0.12
RAE1P78406 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.77■□□□□ 0.12
RAE1P78406 AL031432.2-201ENST00000566714 459 ntBASIC15.77■□□□□ 0.12
RAE1P78406 AL928711.1-201ENST00000570165 459 ntBASIC15.77■□□□□ 0.12
RAE1P78406 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.77■□□□□ 0.12
RAE1P78406 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.77■□□□□ 0.12
RAE1P78406 AL031055.1-201ENST00000606362 631 ntBASIC15.77■□□□□ 0.12
RAE1P78406 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.77■□□□□ 0.12
RAE1P78406 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.77■□□□□ 0.12
RAE1P78406 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.77■□□□□ 0.12
RAE1P78406 AL645728.2-201ENST00000641974 660 ntBASIC15.77■□□□□ 0.12
RAE1P78406 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAE1P78406 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
RAE1P78406 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAE1P78406 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAE1P78406 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAE1P78406 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.77■□□□□ 0.11
RAE1P78406 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
RAE1P78406 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAE1P78406 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAE1P78406 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAE1P78406 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAE1P78406 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RAE1P78406 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.77■□□□□ 0.11
RAE1P78406 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAE1P78406 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAE1P78406 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.76■□□□□ 0.11
RAE1P78406 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms