Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CKS1BP61024 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CKS1BP61024 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CKS1BP61024 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.77□□□□□ -0.53
CKS1BP61024 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS1BP61024 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.77□□□□□ -0.53
CKS1BP61024 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
CKS1BP61024 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
CKS1BP61024 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS1BP61024 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC11.76□□□□□ -0.53
CKS1BP61024 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
CKS1BP61024 NAPSB-206ENST00000562112 1266 ntBASIC11.76□□□□□ -0.53
CKS1BP61024 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.76□□□□□ -0.53
CKS1BP61024 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC11.76□□□□□ -0.53
CKS1BP61024 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 AC010327.5-201ENST00000586923 3061 ntBASIC11.76□□□□□ -0.53
CKS1BP61024 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CKS1BP61024 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 CICP24-201ENST00000605464 2705 ntBASIC11.76□□□□□ -0.53
CKS1BP61024 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS1BP61024 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS1BP61024 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS1BP61024 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS1BP61024 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS1BP61024 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS1BP61024 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CKS1BP61024 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CKS1BP61024 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CKS1BP61024 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS1BP61024 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.75□□□□□ -0.53
CKS1BP61024 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.75□□□□□ -0.53
CKS1BP61024 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS1BP61024 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS1BP61024 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS1BP61024 AC024563.2-201ENST00000603282 481 ntBASIC11.75□□□□□ -0.53
CKS1BP61024 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS1BP61024 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CKS1BP61024 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS1BP61024 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC11.75□□□□□ -0.53
CKS1BP61024 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms