Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LIMK1P53667 AL133338.1-201ENST00000565695 1517 ntBASIC16.41■□□□□ 0.22
LIMK1P53667 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.41■□□□□ 0.22
LIMK1P53667 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LIMK1P53667 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.41■□□□□ 0.22
LIMK1P53667 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.41■□□□□ 0.22
LIMK1P53667 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.41■□□□□ 0.22
LIMK1P53667 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
LIMK1P53667 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.41■□□□□ 0.22
LIMK1P53667 MIR4525-201ENST00000580000 75 ntBASIC16.41■□□□□ 0.22
LIMK1P53667 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.41■□□□□ 0.22
LIMK1P53667 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.41■□□□□ 0.22
LIMK1P53667 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 AC046158.3-201ENST00000624947 2558 ntBASIC16.41■□□□□ 0.22
LIMK1P53667 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.41■□□□□ 0.22
LIMK1P53667 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
LIMK1P53667 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LIMK1P53667 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.41■□□□□ 0.22
LIMK1P53667 AL353732.1-201ENST00000569618 1459 ntBASIC16.41■□□□□ 0.22
LIMK1P53667 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.41■□□□□ 0.22
LIMK1P53667 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIMK1P53667 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
LIMK1P53667 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.4■□□□□ 0.22
LIMK1P53667 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LIMK1P53667 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LIMK1P53667 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.4■□□□□ 0.22
LIMK1P53667 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LIMK1P53667 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 RNU1-129P-201ENST00000384064 167 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 AC142381.1-201ENST00000426099 345 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.4■□□□□ 0.22
LIMK1P53667 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.4■□□□□ 0.22
LIMK1P53667 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.4■□□□□ 0.22
LIMK1P53667 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LIMK1P53667 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LIMK1P53667 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 AC132938.2-201ENST00000579188 680 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 U1.21-201ENST00000580816 167 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 AL031055.1-201ENST00000606362 631 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 AL591163.1-201ENST00000641757 987 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 AL096828.2-201ENST00000567259 1965 ntBASIC16.4■□□□□ 0.22
LIMK1P53667 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.4■□□□□ 0.22
LIMK1P53667 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.4■□□□□ 0.22
LIMK1P53667 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIMK1P53667 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LIMK1P53667 HCG11-201ENST00000411553 5696 ntBASIC16.39■□□□□ 0.21
LIMK1P53667 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LIMK1P53667 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LIMK1P53667 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIMK1P53667 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.39■□□□□ 0.21
LIMK1P53667 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LIMK1P53667 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIMK1P53667 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIMK1P53667 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIMK1P53667 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LIMK1P53667 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LIMK1P53667 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LIMK1P53667 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LIMK1P53667 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms