Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SMSP52788 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 AC006449.5-201ENST00000610658 2098 ntBASIC15.68■□□□□ 0.1
SMSP52788 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 CRYGEP-201ENST00000412192 528 ntBASIC15.68■□□□□ 0.1
SMSP52788 MCCD1P2-201ENST00000423228 335 ntBASIC15.68■□□□□ 0.1
SMSP52788 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.68■□□□□ 0.1
SMSP52788 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.68■□□□□ 0.1
SMSP52788 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.68■□□□□ 0.1
SMSP52788 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.68■□□□□ 0.1
SMSP52788 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.68■□□□□ 0.1
SMSP52788 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.68■□□□□ 0.1
SMSP52788 AL596442.2-201ENST00000610240 980 ntBASIC15.68■□□□□ 0.1
SMSP52788 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 SIGLEC16-201ENST00000599858 1437 ntBASIC15.68■□□□□ 0.1
SMSP52788 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMSP52788 AC008741.2-201ENST00000612792 3115 ntBASIC15.68■□□□□ 0.1
SMSP52788 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SMSP52788 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.67■□□□□ 0.1
SMSP52788 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.67■□□□□ 0.1
SMSP52788 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SMSP52788 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 LINC02084-201ENST00000606069 1096 ntBASIC15.67■□□□□ 0.1
SMSP52788 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 AC092171.3-201ENST00000610122 2651 ntBASIC15.67■□□□□ 0.1
SMSP52788 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMSP52788 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SMSP52788 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SMSP52788 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.66■□□□□ 0.1
SMSP52788 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
SMSP52788 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
SMSP52788 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.66■□□□□ 0.1
SMSP52788 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.66■□□□□ 0.1
SMSP52788 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.66■□□□□ 0.1
SMSP52788 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.66■□□□□ 0.1
SMSP52788 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.66■□□□□ 0.1
SMSP52788 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.66■□□□□ 0.1
SMSP52788 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.66■□□□□ 0.1
SMSP52788 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
SMSP52788 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.66■□□□□ 0.1
SMSP52788 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.66■□□□□ 0.1
SMSP52788 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.66■□□□□ 0.1
SMSP52788 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SMSP52788 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.66■□□□□ 0.1
SMSP52788 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMSP52788 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMSP52788 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms