Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IDH3AP50213 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.23■□□□□ 0.19
IDH3AP50213 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.23■□□□□ 0.19
IDH3AP50213 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 MIR4492-201ENST00000581627 80 ntBASIC16.23■□□□□ 0.19
IDH3AP50213 BNIP3P18-201ENST00000593976 575 ntBASIC16.23■□□□□ 0.19
IDH3AP50213 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
IDH3AP50213 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.23■□□□□ 0.19
IDH3AP50213 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.23■□□□□ 0.19
IDH3AP50213 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IDH3AP50213 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.22■□□□□ 0.19
IDH3AP50213 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.22■□□□□ 0.19
IDH3AP50213 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.22■□□□□ 0.19
IDH3AP50213 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.22■□□□□ 0.19
IDH3AP50213 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.22■□□□□ 0.19
IDH3AP50213 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.22■□□□□ 0.19
IDH3AP50213 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.22■□□□□ 0.19
IDH3AP50213 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.22■□□□□ 0.19
IDH3AP50213 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 CHCHD2P8-201ENST00000429873 447 ntBASIC16.22■□□□□ 0.19
IDH3AP50213 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 AC096582.2-201ENST00000510860 516 ntBASIC16.22■□□□□ 0.19
IDH3AP50213 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
IDH3AP50213 AL136038.3-201ENST00000561909 1096 ntBASIC16.22■□□□□ 0.19
IDH3AP50213 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.22■□□□□ 0.19
IDH3AP50213 AL353135.1-201ENST00000606729 504 ntBASIC16.22■□□□□ 0.19
IDH3AP50213 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IDH3AP50213 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IDH3AP50213 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.22■□□□□ 0.19
IDH3AP50213 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.22■□□□□ 0.19
IDH3AP50213 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
IDH3AP50213 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 AC233702.3-201ENST00000578656 1387 ntBASIC16.22■□□□□ 0.19
IDH3AP50213 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.22■□□□□ 0.19
IDH3AP50213 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.22■□□□□ 0.19
IDH3AP50213 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IDH3AP50213 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IDH3AP50213 PRAL-201ENST00000624952 3286 ntBASIC16.21■□□□□ 0.19
IDH3AP50213 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.21■□□□□ 0.19
IDH3AP50213 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.21■□□□□ 0.19
IDH3AP50213 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
IDH3AP50213 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.21■□□□□ 0.19
IDH3AP50213 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.21■□□□□ 0.19
IDH3AP50213 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IDH3AP50213 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
IDH3AP50213 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms