Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC109322.1-201ENST00000524499 1264 ntBASIC17.59■□□□□ 0.41
LHX1P48742 AL512356.2-201ENST00000546955 174 ntBASIC17.59■□□□□ 0.41
LHX1P48742 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX1P48742 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX1P48742 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.59■□□□□ 0.41
LHX1P48742 AP001059.3-201ENST00000619053 235 ntBASIC17.59■□□□□ 0.41
LHX1P48742 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX1P48742 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX1P48742 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX1P48742 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX1P48742 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX1P48742 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.59■□□□□ 0.41
LHX1P48742 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX1P48742 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
LHX1P48742 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX1P48742 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX1P48742 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LHX1P48742 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LHX1P48742 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LHX1P48742 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX1P48742 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX1P48742 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX1P48742 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.58■□□□□ 0.41
LHX1P48742 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX1P48742 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LHX1P48742 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX1P48742 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX1P48742 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.58■□□□□ 0.41
LHX1P48742 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LHX1P48742 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LHX1P48742 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
LHX1P48742 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX1P48742 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX1P48742 AC142381.1-201ENST00000426099 345 ntBASIC17.58■□□□□ 0.4
LHX1P48742 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.58■□□□□ 0.4
LHX1P48742 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LHX1P48742 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX1P48742 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX1P48742 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX1P48742 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.58■□□□□ 0.4
LHX1P48742 AC093028.1-201ENST00000622998 982 ntBASIC17.58■□□□□ 0.4
LHX1P48742 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.58■□□□□ 0.4
LHX1P48742 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LHX1P48742 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
LHX1P48742 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LHX1P48742 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
LHX1P48742 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
LHX1P48742 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX1P48742 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX1P48742 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.57■□□□□ 0.4
LHX1P48742 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LHX1P48742 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.57■□□□□ 0.4
LHX1P48742 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.57■□□□□ 0.4
LHX1P48742 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX1P48742 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LHX1P48742 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX1P48742 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.57■□□□□ 0.4
LHX1P48742 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.57■□□□□ 0.4
LHX1P48742 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
LHX1P48742 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LHX1P48742 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.57■□□□□ 0.4
LHX1P48742 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.57■□□□□ 0.4
LHX1P48742 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
LHX1P48742 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX1P48742 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LHX1P48742 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LHX1P48742 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LHX1P48742 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX1P48742 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LHX1P48742 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX1P48742 AC080080.1-201ENST00000625121 2420 ntBASIC17.57■□□□□ 0.4
LHX1P48742 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LHX1P48742 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LHX1P48742 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX1P48742 HLA-A-202ENST00000376806 1854 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms