Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
USP8P40818 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.23■□□□□ 0.51
USP8P40818 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.23■□□□□ 0.51
USP8P40818 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.23■□□□□ 0.51
USP8P40818 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
USP8P40818 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.23■□□□□ 0.51
USP8P40818 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 ELK2BP-201ENST00000415014 1224 ntBASIC18.23■□□□□ 0.51
USP8P40818 RNPS1P1-201ENST00000507437 918 ntBASIC18.23■□□□□ 0.51
USP8P40818 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.23■□□□□ 0.51
USP8P40818 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.23■□□□□ 0.51
USP8P40818 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.23■□□□□ 0.51
USP8P40818 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
USP8P40818 TP73-AS1-207ENST00000624167 988 ntBASIC18.23■□□□□ 0.51
USP8P40818 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 AC008741.2-201ENST00000612792 3115 ntBASIC18.23■□□□□ 0.51
USP8P40818 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.23■□□□□ 0.51
USP8P40818 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
USP8P40818 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.23■□□□□ 0.51
USP8P40818 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.23■□□□□ 0.51
USP8P40818 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
USP8P40818 AC005052.1-201ENST00000625181 2492 ntBASIC18.23■□□□□ 0.51
USP8P40818 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.23■□□□□ 0.51
USP8P40818 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
USP8P40818 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP8P40818 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
USP8P40818 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
USP8P40818 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 LAGE3P1-201ENST00000425356 484 ntBASIC18.22■□□□□ 0.51
USP8P40818 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.22■□□□□ 0.51
USP8P40818 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.22■□□□□ 0.51
USP8P40818 RN7SL510P-201ENST00000581311 263 ntBASIC18.22■□□□□ 0.51
USP8P40818 AC006557.2-201ENST00000592985 1240 ntBASIC18.22■□□□□ 0.51
USP8P40818 AL121912.1-201ENST00000603683 238 ntBASIC18.22■□□□□ 0.51
USP8P40818 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.22■□□□□ 0.51
USP8P40818 AC107918.4-202ENST00000641623 219 ntBASIC18.22■□□□□ 0.51
USP8P40818 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP8P40818 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
USP8P40818 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
USP8P40818 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.21■□□□□ 0.51
USP8P40818 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.21■□□□□ 0.51
USP8P40818 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
USP8P40818 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
USP8P40818 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
USP8P40818 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.21■□□□□ 0.51
USP8P40818 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
USP8P40818 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.21■□□□□ 0.51
USP8P40818 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.21■□□□□ 0.51
USP8P40818 DUX4L17-201ENST00000557360 1267 ntBASIC18.21■□□□□ 0.51
USP8P40818 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.21■□□□□ 0.51
USP8P40818 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP8P40818 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
USP8P40818 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms