Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19■□□□□ 0.63
CLCN1P35523 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19■□□□□ 0.63
CLCN1P35523 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19■□□□□ 0.63
CLCN1P35523 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19■□□□□ 0.63
CLCN1P35523 FXN-203ENST00000396366 922 ntTSL 2 BASIC19■□□□□ 0.63
CLCN1P35523 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CLCN1P35523 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 AL121956.5-201ENST00000625261 221 ntBASIC19■□□□□ 0.63
CLCN1P35523 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLCN1P35523 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLCN1P35523 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLCN1P35523 LINC00528-201ENST00000600723 2160 ntBASIC19■□□□□ 0.63
CLCN1P35523 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19■□□□□ 0.63
CLCN1P35523 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CLCN1P35523 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19■□□□□ 0.63
CLCN1P35523 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19■□□□□ 0.63
CLCN1P35523 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLCN1P35523 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CLCN1P35523 AC005332.1-201ENST00000577698 1310 ntBASIC19■□□□□ 0.63
CLCN1P35523 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLCN1P35523 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLCN1P35523 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCN1P35523 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLCN1P35523 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.99■□□□□ 0.63
CLCN1P35523 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCN1P35523 AC096633.1-201ENST00000422446 749 ntBASIC18.99■□□□□ 0.63
CLCN1P35523 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.99■□□□□ 0.63
CLCN1P35523 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.99■□□□□ 0.63
CLCN1P35523 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLCN1P35523 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.99■□□□□ 0.63
CLCN1P35523 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCN1P35523 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.99■□□□□ 0.63
CLCN1P35523 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CLCN1P35523 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLCN1P35523 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLCN1P35523 AL391256.1-201ENST00000443260 1855 ntBASIC18.99■□□□□ 0.63
CLCN1P35523 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCN1P35523 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CLCN1P35523 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCN1P35523 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCN1P35523 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLCN1P35523 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 AL845331.1-201ENST00000424978 1190 ntBASIC18.98■□□□□ 0.63
CLCN1P35523 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.98■□□□□ 0.63
CLCN1P35523 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.98■□□□□ 0.63
CLCN1P35523 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.98■□□□□ 0.63
CLCN1P35523 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCN1P35523 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCN1P35523 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CLCN1P35523 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLCN1P35523 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCN1P35523 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCN1P35523 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms