Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCL1P22362 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CCL1P22362 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.33□□□□□ -0.11
CCL1P22362 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCL1P22362 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCL1P22362 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.33□□□□□ -0.11
CCL1P22362 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.33□□□□□ -0.11
CCL1P22362 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL1P22362 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL1P22362 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCL1P22362 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCL1P22362 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCL1P22362 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.33□□□□□ -0.12
CCL1P22362 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL1P22362 UNC93B7-201ENST00000509439 705 ntBASIC14.33□□□□□ -0.12
CCL1P22362 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.33□□□□□ -0.12
CCL1P22362 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL1P22362 MIR3909-201ENST00000579518 119 ntBASIC14.33□□□□□ -0.12
CCL1P22362 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.33□□□□□ -0.12
CCL1P22362 ACTL9-202ENST00000612068 1252 ntBASIC14.33□□□□□ -0.12
CCL1P22362 AC005593.1-201ENST00000624894 515 ntBASIC14.33□□□□□ -0.12
CCL1P22362 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL1P22362 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL1P22362 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCL1P22362 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CCL1P22362 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL1P22362 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCL1P22362 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCL1P22362 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL1P22362 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL1P22362 AC008894.3-201ENST00000624324 3103 ntBASIC14.32□□□□□ -0.12
CCL1P22362 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL1P22362 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 CICP6-201ENST00000457191 2729 ntBASIC14.32□□□□□ -0.12
CCL1P22362 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL1P22362 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCL1P22362 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCL1P22362 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL1P22362 KRT18P67-201ENST00000432816 1264 ntBASIC14.32□□□□□ -0.12
CCL1P22362 HNRNPDP1-201ENST00000439535 754 ntBASIC14.32□□□□□ -0.12
CCL1P22362 FAM185BP-201ENST00000443595 716 ntBASIC14.32□□□□□ -0.12
CCL1P22362 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL1P22362 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL1P22362 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL1P22362 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL1P22362 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCL1P22362 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL1P22362 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL1P22362 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL1P22362 MIR4515-201ENST00000584082 81 ntBASIC14.32□□□□□ -0.12
CCL1P22362 AL121912.1-201ENST00000603683 238 ntBASIC14.32□□□□□ -0.12
CCL1P22362 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCL1P22362 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL1P22362 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL1P22362 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL1P22362 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL1P22362 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCL1P22362 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 AC105917.1-201ENST00000506637 2539 ntBASIC14.32□□□□□ -0.12
CCL1P22362 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL1P22362 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL1P22362 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCL1P22362 AP002414.3-201ENST00000589352 1468 ntBASIC14.31□□□□□ -0.12
CCL1P22362 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL1P22362 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms