Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.69□□□□□ -0.06
UBCP0CG48 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UBCP0CG48 NPAP1P7-201ENST00000613027 823 ntBASIC14.69□□□□□ -0.06
UBCP0CG48 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.69□□□□□ -0.06
UBCP0CG48 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
UBCP0CG48 AC132872.4-202ENST00000622924 2756 ntBASIC14.69□□□□□ -0.06
UBCP0CG48 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.69□□□□□ -0.06
UBCP0CG48 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.69□□□□□ -0.06
UBCP0CG48 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.69□□□□□ -0.06
UBCP0CG48 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBCP0CG48 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UBCP0CG48 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.68□□□□□ -0.06
UBCP0CG48 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 KRT16P4-201ENST00000453883 522 ntBASIC14.68□□□□□ -0.06
UBCP0CG48 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.68□□□□□ -0.06
UBCP0CG48 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 AL139288.1-201ENST00000623748 933 ntBASIC14.68□□□□□ -0.06
UBCP0CG48 AL022326.1-202ENST00000641533 845 ntBASIC14.68□□□□□ -0.06
UBCP0CG48 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.68□□□□□ -0.06
UBCP0CG48 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.68□□□□□ -0.06
UBCP0CG48 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.68□□□□□ -0.06
UBCP0CG48 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBCP0CG48 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.67□□□□□ -0.06
UBCP0CG48 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
UBCP0CG48 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.67□□□□□ -0.06
UBCP0CG48 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.67□□□□□ -0.06
UBCP0CG48 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.67□□□□□ -0.06
UBCP0CG48 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.67□□□□□ -0.06
UBCP0CG48 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.67□□□□□ -0.06
UBCP0CG48 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.67□□□□□ -0.06
UBCP0CG48 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.67□□□□□ -0.06
UBCP0CG48 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.67□□□□□ -0.06
UBCP0CG48 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
UBCP0CG48 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.67□□□□□ -0.06
UBCP0CG48 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.67□□□□□ -0.06
UBCP0CG48 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms