Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 DOC2GP-202ENST00000514950 1163 ntBASIC18.67■□□□□ 0.58
HOXC6P09630 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.67■□□□□ 0.58
HOXC6P09630 HILS1-202ENST00000545329 423 ntBASIC18.67■□□□□ 0.58
HOXC6P09630 CHCHD2P3-201ENST00000603038 451 ntBASIC18.67■□□□□ 0.58
HOXC6P09630 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.67■□□□□ 0.58
HOXC6P09630 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.67■□□□□ 0.58
HOXC6P09630 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.67■□□□□ 0.58
HOXC6P09630 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HOXC6P09630 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXC6P09630 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HOXC6P09630 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC6P09630 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC6P09630 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC6P09630 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC6P09630 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC6P09630 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
HOXC6P09630 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC6P09630 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC6P09630 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC6P09630 SPDYE19P-201ENST00000338590 713 ntBASIC18.66■□□□□ 0.58
HOXC6P09630 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC6P09630 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC6P09630 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
HOXC6P09630 RN7SL752P-201ENST00000463779 287 ntBASIC18.66■□□□□ 0.58
HOXC6P09630 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC6P09630 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXC6P09630 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXC6P09630 AC139713.2-201ENST00000641328 2723 ntBASIC18.66■□□□□ 0.58
HOXC6P09630 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC6P09630 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HOXC6P09630 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC6P09630 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HOXC6P09630 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC6P09630 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC6P09630 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC6P09630 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HOXC6P09630 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
HOXC6P09630 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HOXC6P09630 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HOXC6P09630 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HOXC6P09630 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC6P09630 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXC6P09630 AL023806.1-201ENST00000603994 1649 ntBASIC18.65■□□□□ 0.58
HOXC6P09630 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC6P09630 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC6P09630 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HOXC6P09630 SPDYE17-201ENST00000412399 783 ntBASIC18.65■□□□□ 0.58
HOXC6P09630 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXC6P09630 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXC6P09630 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC6P09630 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 SLC7A15P-201ENST00000424028 1363 ntBASIC18.65■□□□□ 0.58
HOXC6P09630 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC6P09630 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HOXC6P09630 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC6P09630 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXC6P09630 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC6P09630 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC6P09630 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC6P09630 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC6P09630 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXC6P09630 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC6P09630 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC6P09630 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXC6P09630 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXC6P09630 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXC6P09630 AC011495.1-201ENST00000498085 584 ntBASIC18.64■□□□□ 0.57
HOXC6P09630 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXC6P09630 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC6P09630 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC6P09630 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC6P09630 AC044860.1-202ENST00000559481 777 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms