Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CAPN1P07384 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN1P07384 AL662844.4-201ENST00000606367 2838 ntBASIC16.46■□□□□ 0.23
CAPN1P07384 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.46■□□□□ 0.23
CAPN1P07384 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN1P07384 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN1P07384 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.46■□□□□ 0.23
CAPN1P07384 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CAPN1P07384 PCDH8P1-201ENST00000428983 2773 ntBASIC16.46■□□□□ 0.23
CAPN1P07384 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
CAPN1P07384 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.46■□□□□ 0.23
CAPN1P07384 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.46■□□□□ 0.23
CAPN1P07384 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 ELK2BP-201ENST00000415014 1224 ntBASIC16.46■□□□□ 0.23
CAPN1P07384 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN1P07384 AC007967.2-201ENST00000432613 625 ntBASIC16.46■□□□□ 0.23
CAPN1P07384 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.46■□□□□ 0.23
CAPN1P07384 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CAPN1P07384 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.46■□□□□ 0.23
CAPN1P07384 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.46■□□□□ 0.23
CAPN1P07384 AC005593.1-201ENST00000624894 515 ntBASIC16.46■□□□□ 0.23
CAPN1P07384 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN1P07384 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 AL021920.2-201ENST00000624828 1351 ntBASIC16.46■□□□□ 0.23
CAPN1P07384 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.46■□□□□ 0.23
CAPN1P07384 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN1P07384 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CAPN1P07384 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CAPN1P07384 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CAPN1P07384 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CAPN1P07384 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CAPN1P07384 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CAPN1P07384 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CAPN1P07384 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.45■□□□□ 0.22
CAPN1P07384 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.45■□□□□ 0.22
CAPN1P07384 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.45■□□□□ 0.22
CAPN1P07384 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.45■□□□□ 0.22
CAPN1P07384 AL353135.1-201ENST00000606729 504 ntBASIC16.45■□□□□ 0.22
CAPN1P07384 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.45■□□□□ 0.22
CAPN1P07384 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.45■□□□□ 0.22
CAPN1P07384 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.45■□□□□ 0.22
CAPN1P07384 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN1P07384 NCF1C-201ENST00000438382 1427 ntBASIC16.45■□□□□ 0.22
CAPN1P07384 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CAPN1P07384 AL590787.1-201ENST00000568856 1315 ntBASIC16.45■□□□□ 0.22
CAPN1P07384 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN1P07384 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CAPN1P07384 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.44■□□□□ 0.22
CAPN1P07384 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 AC006449.5-201ENST00000610658 2098 ntBASIC16.44■□□□□ 0.22
CAPN1P07384 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN1P07384 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CAPN1P07384 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CAPN1P07384 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CAPN1P07384 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN1P07384 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms