Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
COL5A2P05997 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL5A2P05997 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL5A2P05997 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL5A2P05997 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC21.55■■□□□ 1.04
COL5A2P05997 AC092933.1-201ENST00000393644 945 ntBASIC21.55■■□□□ 1.04
COL5A2P05997 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.55■■□□□ 1.04
COL5A2P05997 AL162726.2-201ENST00000438986 1017 ntBASIC21.55■■□□□ 1.04
COL5A2P05997 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.55■■□□□ 1.04
COL5A2P05997 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.55■■□□□ 1.04
COL5A2P05997 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.55■■□□□ 1.04
COL5A2P05997 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.55■■□□□ 1.04
COL5A2P05997 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL5A2P05997 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.55■■□□□ 1.04
COL5A2P05997 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL5A2P05997 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
COL5A2P05997 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
COL5A2P05997 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.55■■□□□ 1.04
COL5A2P05997 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
COL5A2P05997 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
COL5A2P05997 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
COL5A2P05997 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.54■■□□□ 1.04
COL5A2P05997 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.54■■□□□ 1.04
COL5A2P05997 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.54■■□□□ 1.04
COL5A2P05997 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 BCYRN1-201ENST00000418539 200 ntBASIC21.54■■□□□ 1.04
COL5A2P05997 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC21.54■■□□□ 1.04
COL5A2P05997 AC104596.2-201ENST00000512793 793 ntBASIC21.54■■□□□ 1.04
COL5A2P05997 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.54■■□□□ 1.04
COL5A2P05997 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.54■■□□□ 1.04
COL5A2P05997 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
COL5A2P05997 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.54■■□□□ 1.04
COL5A2P05997 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
COL5A2P05997 AL391256.1-201ENST00000443260 1855 ntBASIC21.54■■□□□ 1.04
COL5A2P05997 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.54■■□□□ 1.04
COL5A2P05997 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.54■■□□□ 1.04
COL5A2P05997 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
COL5A2P05997 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL5A2P05997 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.53■■□□□ 1.04
COL5A2P05997 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21.53■■□□□ 1.04
COL5A2P05997 USB1-202ENST00000423271 1217 ntTSL 2 BASIC21.53■■□□□ 1.04
COL5A2P05997 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.53■■□□□ 1.04
COL5A2P05997 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL5A2P05997 AC099548.2-209ENST00000480264 625 ntBASIC21.53■■□□□ 1.04
COL5A2P05997 CD74-212ENST00000524315 584 ntTSL 5 BASIC21.53■■□□□ 1.04
COL5A2P05997 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.53■■□□□ 1.04
COL5A2P05997 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.53■■□□□ 1.04
COL5A2P05997 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL5A2P05997 AC134043.2-201ENST00000624206 2238 ntBASIC21.53■■□□□ 1.04
COL5A2P05997 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
COL5A2P05997 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL5A2P05997 AC020907.1-201ENST00000616460 1350 ntBASIC21.53■■□□□ 1.04
COL5A2P05997 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
COL5A2P05997 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL5A2P05997 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL5A2P05997 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COL5A2P05997 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL5A2P05997 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
COL5A2P05997 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL5A2P05997 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL5A2P05997 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.52■■□□□ 1.04
COL5A2P05997 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.52■■□□□ 1.04
COL5A2P05997 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 FO393414.2-201ENST00000405153 598 ntBASIC21.52■■□□□ 1.04
COL5A2P05997 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC21.52■■□□□ 1.04
COL5A2P05997 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC21.52■■□□□ 1.04
COL5A2P05997 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC21.52■■□□□ 1.04
COL5A2P05997 AC036164.1-201ENST00000570544 333 ntBASIC21.52■■□□□ 1.04
COL5A2P05997 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.52■■□□□ 1.04
COL5A2P05997 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.52■■□□□ 1.04
COL5A2P05997 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COL5A2P05997 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL5A2P05997 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.52■■□□□ 1.03
COL5A2P05997 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
COL5A2P05997 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL5A2P05997 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.52■■□□□ 1.03
COL5A2P05997 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.52■■□□□ 1.03
COL5A2P05997 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
COL5A2P05997 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL5A2P05997 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms