Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.05■□□□□ 0
HLA-DPB1P04440 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HLA-DPB1P04440 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
HLA-DPB1P04440 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.05■□□□□ 0
HLA-DPB1P04440 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.05■□□□□ 0
HLA-DPB1P04440 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HLA-DPB1P04440 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HLA-DPB1P04440 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HLA-DPB1P04440 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HLA-DPB1P04440 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.05■□□□□ -0
HLA-DPB1P04440 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HLA-DPB1P04440 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 NUS1P2-201ENST00000417358 873 ntBASIC15.05■□□□□ -0
HLA-DPB1P04440 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HLA-DPB1P04440 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.05■□□□□ -0
HLA-DPB1P04440 MIR3652-201ENST00000579335 131 ntBASIC15.05■□□□□ -0
HLA-DPB1P04440 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.05■□□□□ -0
HLA-DPB1P04440 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.05■□□□□ -0
HLA-DPB1P04440 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.05■□□□□ -0
HLA-DPB1P04440 AL135999.2-201ENST00000622438 1686 ntBASIC15.05■□□□□ -0
HLA-DPB1P04440 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.05■□□□□ -0
HLA-DPB1P04440 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.05■□□□□ -0
HLA-DPB1P04440 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
HLA-DPB1P04440 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.05■□□□□ -0
HLA-DPB1P04440 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
HLA-DPB1P04440 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HLA-DPB1P04440 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
HLA-DPB1P04440 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
HLA-DPB1P04440 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DPB1P04440 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
HLA-DPB1P04440 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HLA-DPB1P04440 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DPB1P04440 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DPB1P04440 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DPB1P04440 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 FAM220CP-201ENST00000395253 831 ntBASIC15.04■□□□□ -0
HLA-DPB1P04440 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.04■□□□□ -0
HLA-DPB1P04440 RCN1P2-201ENST00000398357 915 ntBASIC15.04■□□□□ -0
HLA-DPB1P04440 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HLA-DPB1P04440 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DPB1P04440 AC103564.2-201ENST00000432853 1299 ntBASIC15.04■□□□□ -0
HLA-DPB1P04440 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DPB1P04440 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DPB1P04440 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.04■□□□□ -0
HLA-DPB1P04440 FOSL1P1-201ENST00000511041 816 ntBASIC15.04■□□□□ -0
HLA-DPB1P04440 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.04■□□□□ -0
HLA-DPB1P04440 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DPB1P04440 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DPB1P04440 AC126177.1-201ENST00000547829 2218 ntBASIC15.04■□□□□ -0
HLA-DPB1P04440 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DPB1P04440 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HLA-DPB1P04440 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DPB1P04440 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DPB1P04440 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.03■□□□□ -0
HLA-DPB1P04440 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DPB1P04440 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 2129.3 ms