Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND1P03886 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND1P03886 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.79■□□□□ 0.12
MT-ND1P03886 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND1P03886 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND1P03886 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND1P03886 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.79■□□□□ 0.12
MT-ND1P03886 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.79■□□□□ 0.12
MT-ND1P03886 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.79■□□□□ 0.12
MT-ND1P03886 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND1P03886 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
MT-ND1P03886 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND1P03886 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 AC126177.1-201ENST00000547829 2218 ntBASIC15.79■□□□□ 0.12
MT-ND1P03886 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 AC073347.1-201ENST00000421633 2643 ntBASIC15.79■□□□□ 0.12
MT-ND1P03886 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND1P03886 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND1P03886 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND1P03886 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MT-ND1P03886 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND1P03886 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND1P03886 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 AC016734.2-201ENST00000624325 1377 ntBASIC15.78■□□□□ 0.12
MT-ND1P03886 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND1P03886 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-ND1P03886 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.78■□□□□ 0.12
MT-ND1P03886 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.78■□□□□ 0.12
MT-ND1P03886 FAM86EP-206ENST00000510506 987 ntBASIC15.78■□□□□ 0.12
MT-ND1P03886 KRT18P21-201ENST00000515767 1272 ntBASIC15.78■□□□□ 0.12
MT-ND1P03886 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.78■□□□□ 0.12
MT-ND1P03886 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND1P03886 AL049597.2-201ENST00000565575 961 ntBASIC15.78■□□□□ 0.12
MT-ND1P03886 NTF6B-201ENST00000591913 560 ntBASIC15.78■□□□□ 0.12
MT-ND1P03886 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.78■□□□□ 0.12
MT-ND1P03886 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND1P03886 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.78■□□□□ 0.12
MT-ND1P03886 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-ND1P03886 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-ND1P03886 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 NFIC-211ENST00000641145 8399 ntBASIC15.78■□□□□ 0.12
MT-ND1P03886 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
MT-ND1P03886 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-ND1P03886 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.77■□□□□ 0.12
MT-ND1P03886 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
MT-ND1P03886 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.77■□□□□ 0.12
MT-ND1P03886 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-ND1P03886 LINC00895-201ENST00000629028 1637 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms