Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
COL4A1P02462 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL4A1P02462 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.09■□□□□ 0.81
COL4A1P02462 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
COL4A1P02462 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A1P02462 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A1P02462 PCGF3-213ENST00000620529 1899 ntBASIC20.08■□□□□ 0.81
COL4A1P02462 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A1P02462 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COL4A1P02462 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.08■□□□□ 0.81
COL4A1P02462 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A1P02462 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A1P02462 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A1P02462 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
COL4A1P02462 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
COL4A1P02462 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.08■□□□□ 0.81
COL4A1P02462 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.08■□□□□ 0.81
COL4A1P02462 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.08■□□□□ 0.81
COL4A1P02462 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.08■□□□□ 0.81
COL4A1P02462 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.08■□□□□ 0.81
COL4A1P02462 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.08■□□□□ 0.81
COL4A1P02462 AL391069.4-201ENST00000609583 481 ntBASIC20.08■□□□□ 0.81
COL4A1P02462 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
COL4A1P02462 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A1P02462 AL358472.5-202ENST00000641448 1267 ntBASIC20.08■□□□□ 0.81
COL4A1P02462 AL033527.5-202ENST00000641632 1098 ntBASIC20.08■□□□□ 0.81
COL4A1P02462 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A1P02462 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A1P02462 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.08■□□□□ 0.8
COL4A1P02462 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL4A1P02462 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.08■□□□□ 0.8
COL4A1P02462 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A1P02462 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COL4A1P02462 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COL4A1P02462 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A1P02462 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A1P02462 DOC2GP-202ENST00000514950 1163 ntBASIC20.07■□□□□ 0.8
COL4A1P02462 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
COL4A1P02462 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL4A1P02462 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
COL4A1P02462 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A1P02462 CTBP2P3-201ENST00000585629 1255 ntBASIC20.07■□□□□ 0.8
COL4A1P02462 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A1P02462 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A1P02462 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A1P02462 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.06■□□□□ 0.8
COL4A1P02462 CYP4F24P-201ENST00000586049 1580 ntBASIC20.06■□□□□ 0.8
COL4A1P02462 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A1P02462 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A1P02462 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A1P02462 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
COL4A1P02462 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A1P02462 IGHV3-71-201ENST00000523324 359 ntBASIC20.06■□□□□ 0.8
COL4A1P02462 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.06■□□□□ 0.8
COL4A1P02462 SNX29P1-201ENST00000548357 1007 ntBASIC20.06■□□□□ 0.8
COL4A1P02462 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.06■□□□□ 0.8
COL4A1P02462 AC006538.1-201ENST00000567905 1585 ntBASIC20.06■□□□□ 0.8
COL4A1P02462 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.06■□□□□ 0.8
COL4A1P02462 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A1P02462 AL008721.1-201ENST00000609964 604 ntBASIC20.06■□□□□ 0.8
COL4A1P02462 AC020765.3-201ENST00000613051 740 ntBASIC20.06■□□□□ 0.8
COL4A1P02462 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.06■□□□□ 0.8
COL4A1P02462 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A1P02462 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.06■□□□□ 0.8
COL4A1P02462 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.05■□□□□ 0.8
COL4A1P02462 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A1P02462 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A1P02462 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL4A1P02462 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A1P02462 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A1P02462 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A1P02462 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A1P02462 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A1P02462 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A1P02462 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL4A1P02462 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.05■□□□□ 0.8
COL4A1P02462 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.05■□□□□ 0.8
COL4A1P02462 ELK1P1-201ENST00000485699 580 ntBASIC20.05■□□□□ 0.8
COL4A1P02462 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms