Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CBX6O95503 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX6O95503 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX6O95503 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.69■□□□□ 0.26
CBX6O95503 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.69■□□□□ 0.26
CBX6O95503 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CBX6O95503 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CBX6O95503 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX6O95503 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CBX6O95503 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.69■□□□□ 0.26
CBX6O95503 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.69■□□□□ 0.26
CBX6O95503 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.69■□□□□ 0.26
CBX6O95503 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 GPR32P1-201ENST00000601788 811 ntBASIC16.69■□□□□ 0.26
CBX6O95503 REXO1L6P-202ENST00000619970 1078 ntBASIC16.69■□□□□ 0.26
CBX6O95503 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CBX6O95503 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX6O95503 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.69■□□□□ 0.26
CBX6O95503 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX6O95503 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX6O95503 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CBX6O95503 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.69■□□□□ 0.26
CBX6O95503 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX6O95503 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CBX6O95503 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.68■□□□□ 0.26
CBX6O95503 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.68■□□□□ 0.26
CBX6O95503 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CBX6O95503 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 ME2P1-201ENST00000426028 1970 ntBASIC16.68■□□□□ 0.26
CBX6O95503 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.68■□□□□ 0.26
CBX6O95503 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CBX6O95503 KRT18P13-201ENST00000400056 1290 ntBASIC16.68■□□□□ 0.26
CBX6O95503 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.68■□□□□ 0.26
CBX6O95503 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.68■□□□□ 0.26
CBX6O95503 AF238378.1-201ENST00000526806 358 ntBASIC16.68■□□□□ 0.26
CBX6O95503 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.68■□□□□ 0.26
CBX6O95503 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.68■□□□□ 0.26
CBX6O95503 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.68■□□□□ 0.26
CBX6O95503 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.68■□□□□ 0.26
CBX6O95503 FRMD8P1-201ENST00000440433 1524 ntBASIC16.68■□□□□ 0.26
CBX6O95503 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CBX6O95503 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.68■□□□□ 0.26
CBX6O95503 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CBX6O95503 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CBX6O95503 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CBX6O95503 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CBX6O95503 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CBX6O95503 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CBX6O95503 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.67■□□□□ 0.26
CBX6O95503 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CBX6O95503 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CBX6O95503 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CBX6O95503 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CBX6O95503 AC010491.1-201ENST00000563101 2797 ntBASIC16.67■□□□□ 0.26
CBX6O95503 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CBX6O95503 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CBX6O95503 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms