Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.21■□□□□ 0.03
CLPXO76031 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPXO76031 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPXO76031 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPXO76031 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.21■□□□□ 0.03
CLPXO76031 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.21■□□□□ 0.03
CLPXO76031 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.21■□□□□ 0.03
CLPXO76031 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.21■□□□□ 0.03
CLPXO76031 AC141257.4-201ENST00000634557 245 ntBASIC15.21■□□□□ 0.03
CLPXO76031 AC136944.6-201ENST00000634818 245 ntBASIC15.21■□□□□ 0.03
CLPXO76031 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLPXO76031 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLPXO76031 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.21■□□□□ 0.02
CLPXO76031 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.21■□□□□ 0.02
CLPXO76031 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLPXO76031 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLPXO76031 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.2■□□□□ 0.02
CLPXO76031 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLPXO76031 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 GRK6P1-201ENST00000400595 1711 ntBASIC15.2■□□□□ 0.02
CLPXO76031 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CLPXO76031 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.2■□□□□ 0.02
CLPXO76031 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLPXO76031 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLPXO76031 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLPXO76031 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.2■□□□□ 0.02
CLPXO76031 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.2■□□□□ 0.02
CLPXO76031 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLPXO76031 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.2■□□□□ 0.02
CLPXO76031 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLPXO76031 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.2■□□□□ 0.02
CLPXO76031 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLPXO76031 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLPXO76031 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 AC005089.1-201ENST00000619486 2241 ntBASIC15.2■□□□□ 0.02
CLPXO76031 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.2■□□□□ 0.02
CLPXO76031 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.2■□□□□ 0.02
CLPXO76031 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLPXO76031 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CLPXO76031 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.2■□□□□ 0.02
CLPXO76031 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.2■□□□□ 0.02
CLPXO76031 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLPXO76031 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.19■□□□□ 0.02
CLPXO76031 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.19■□□□□ 0.02
CLPXO76031 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.19■□□□□ 0.02
CLPXO76031 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.19■□□□□ 0.02
CLPXO76031 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 TSPY5P-201ENST00000426936 936 ntBASIC15.19■□□□□ 0.02
CLPXO76031 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.19■□□□□ 0.02
CLPXO76031 COX11P1-201ENST00000489116 835 ntBASIC15.19■□□□□ 0.02
CLPXO76031 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.19■□□□□ 0.02
CLPXO76031 AC104390.1-201ENST00000555663 520 ntBASIC15.19■□□□□ 0.02
CLPXO76031 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.19■□□□□ 0.02
CLPXO76031 AC139887.4-201ENST00000607877 719 ntBASIC15.19■□□□□ 0.02
CLPXO76031 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLPXO76031 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.19■□□□□ 0.02
CLPXO76031 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms