Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHL41O60662 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
KLHL41O60662 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.62■□□□□ 0.25
KLHL41O60662 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.62■□□□□ 0.25
KLHL41O60662 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.62■□□□□ 0.25
KLHL41O60662 AC139887.3-201ENST00000568585 713 ntBASIC16.62■□□□□ 0.25
KLHL41O60662 STK25P1-201ENST00000585406 838 ntBASIC16.62■□□□□ 0.25
KLHL41O60662 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
KLHL41O60662 AL138831.2-201ENST00000606564 490 ntBASIC16.62■□□□□ 0.25
KLHL41O60662 TP73-AS1-207ENST00000624167 988 ntBASIC16.62■□□□□ 0.25
KLHL41O60662 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KLHL41O60662 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
KLHL41O60662 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KLHL41O60662 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
KLHL41O60662 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.62■□□□□ 0.25
KLHL41O60662 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHL41O60662 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.62■□□□□ 0.25
KLHL41O60662 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHL41O60662 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHL41O60662 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.62■□□□□ 0.25
KLHL41O60662 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KLHL41O60662 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL41O60662 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KLHL41O60662 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 INTS4P1-201ENST00000438455 1935 ntBASIC16.61■□□□□ 0.25
KLHL41O60662 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.61■□□□□ 0.25
KLHL41O60662 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.61■□□□□ 0.25
KLHL41O60662 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.61■□□□□ 0.25
KLHL41O60662 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.61■□□□□ 0.25
KLHL41O60662 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.61■□□□□ 0.25
KLHL41O60662 AF228730.7-201ENST00000641842 219 ntBASIC16.61■□□□□ 0.25
KLHL41O60662 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.61■□□□□ 0.25
KLHL41O60662 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHL41O60662 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 AC024909.3-201ENST00000611513 2257 ntBASIC16.61■□□□□ 0.25
KLHL41O60662 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KLHL41O60662 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHL41O60662 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.6■□□□□ 0.25
KLHL41O60662 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
KLHL41O60662 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KLHL41O60662 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.6■□□□□ 0.25
KLHL41O60662 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.6■□□□□ 0.25
KLHL41O60662 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.6■□□□□ 0.25
KLHL41O60662 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.6■□□□□ 0.25
KLHL41O60662 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.6■□□□□ 0.25
KLHL41O60662 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.6■□□□□ 0.25
KLHL41O60662 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.6■□□□□ 0.25
KLHL41O60662 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 AC018712.1-201ENST00000455767 687 ntBASIC16.6■□□□□ 0.25
KLHL41O60662 AC122714.2-201ENST00000502787 707 ntBASIC16.6■□□□□ 0.25
KLHL41O60662 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms