Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.67□□□□□ -0.22
SSSCA1O60232 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
SSSCA1O60232 AL031432.5-201ENST00000641059 760 ntBASIC13.67□□□□□ -0.22
SSSCA1O60232 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.67□□□□□ -0.22
SSSCA1O60232 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.67□□□□□ -0.22
SSSCA1O60232 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
SSSCA1O60232 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
SSSCA1O60232 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
SSSCA1O60232 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSSCA1O60232 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.66□□□□□ -0.22
SSSCA1O60232 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.66□□□□□ -0.22
SSSCA1O60232 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SSSCA1O60232 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.66□□□□□ -0.22
SSSCA1O60232 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.66□□□□□ -0.22
SSSCA1O60232 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SSSCA1O60232 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SSSCA1O60232 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SSSCA1O60232 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.66□□□□□ -0.22
SSSCA1O60232 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SSSCA1O60232 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.66□□□□□ -0.22
SSSCA1O60232 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.66□□□□□ -0.22
SSSCA1O60232 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SSSCA1O60232 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.66□□□□□ -0.22
SSSCA1O60232 AC073347.1-201ENST00000421633 2643 ntBASIC13.66□□□□□ -0.22
SSSCA1O60232 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.66□□□□□ -0.22
SSSCA1O60232 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SSSCA1O60232 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.66□□□□□ -0.22
SSSCA1O60232 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.66□□□□□ -0.22
SSSCA1O60232 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSSCA1O60232 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 KRT18P22-201ENST00000402024 1347 ntBASIC13.65□□□□□ -0.22
SSSCA1O60232 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
SSSCA1O60232 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.65□□□□□ -0.22
SSSCA1O60232 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.65□□□□□ -0.22
SSSCA1O60232 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SSSCA1O60232 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.65□□□□□ -0.22
SSSCA1O60232 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.65□□□□□ -0.22
SSSCA1O60232 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.65□□□□□ -0.22
SSSCA1O60232 COX11P1-201ENST00000489116 835 ntBASIC13.65□□□□□ -0.22
SSSCA1O60232 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.65□□□□□ -0.22
SSSCA1O60232 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.65□□□□□ -0.22
SSSCA1O60232 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SSSCA1O60232 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
SSSCA1O60232 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 AC006449.6-201ENST00000612330 2296 ntBASIC13.65□□□□□ -0.22
SSSCA1O60232 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSSCA1O60232 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SSSCA1O60232 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
SSSCA1O60232 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SSSCA1O60232 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms