Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CXCL13O43927 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL13O43927 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCL13O43927 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCL13O43927 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CXCL13O43927 AC016027.1-202ENST00000607927 1699 ntBASIC14.91□□□□□ -0.02
CXCL13O43927 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CXCL13O43927 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCL13O43927 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CXCL13O43927 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCL13O43927 ADH5P3-201ENST00000433842 1137 ntBASIC14.91□□□□□ -0.02
CXCL13O43927 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.91□□□□□ -0.02
CXCL13O43927 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.91□□□□□ -0.02
CXCL13O43927 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.91□□□□□ -0.02
CXCL13O43927 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.91□□□□□ -0.02
CXCL13O43927 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CXCL13O43927 FAM86C2P-203ENST00000528684 1004 ntBASIC14.91□□□□□ -0.02
CXCL13O43927 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCL13O43927 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CXCL13O43927 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 AC026120.1-201ENST00000611536 926 ntBASIC14.91□□□□□ -0.02
CXCL13O43927 AC079781.4-201ENST00000641908 219 ntBASIC14.91□□□□□ -0.02
CXCL13O43927 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 WASH6P-202ENST00000359512 1437 ntBASIC14.91□□□□□ -0.02
CXCL13O43927 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
CXCL13O43927 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL13O43927 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CXCL13O43927 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CXCL13O43927 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CXCL13O43927 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CXCL13O43927 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
CXCL13O43927 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL13O43927 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CXCL13O43927 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CXCL13O43927 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.9□□□□□ -0.02
CXCL13O43927 AL512652.2-201ENST00000625156 1716 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL13O43927 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL13O43927 TFAMP1-201ENST00000412727 736 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 AP006288.1-201ENST00000446065 395 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 DNAJB3-202ENST00000449667 1266 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 SPDYE11-202ENST00000450699 704 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.9□□□□□ -0.02
CXCL13O43927 SNHG9-202ENST00000564014 471 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 AL135744.1-201ENST00000565098 629 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 SPDYE9P-201ENST00000570642 692 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.9□□□□□ -0.02
CXCL13O43927 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 SPDYE10P-202ENST00000612005 668 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 SPDYE8P-202ENST00000612377 668 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL13O43927 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CXCL13O43927 UBALD1-205ENST00000590891 2641 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL13O43927 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.9□□□□□ -0.02
CXCL13O43927 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CXCL13O43927 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms