Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTN4O43707 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTN4O43707 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
ACTN4O43707 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
ACTN4O43707 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.69■□□□□ 0.58
ACTN4O43707 AC046158.3-201ENST00000624947 2558 ntBASIC18.69■□□□□ 0.58
ACTN4O43707 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.69■□□□□ 0.58
ACTN4O43707 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.69■□□□□ 0.58
ACTN4O43707 AF186996.4-201ENST00000467186 377 ntBASIC18.69■□□□□ 0.58
ACTN4O43707 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ACTN4O43707 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
ACTN4O43707 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ACTN4O43707 AL049840.3-201ENST00000602669 611 ntBASIC18.69■□□□□ 0.58
ACTN4O43707 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.69■□□□□ 0.58
ACTN4O43707 AL031008.1-201ENST00000619963 541 ntBASIC18.69■□□□□ 0.58
ACTN4O43707 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ACTN4O43707 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ACTN4O43707 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.69■□□□□ 0.58
ACTN4O43707 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
ACTN4O43707 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTN4O43707 AL365203.3-201ENST00000609742 2057 ntBASIC18.69■□□□□ 0.58
ACTN4O43707 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.68■□□□□ 0.58
ACTN4O43707 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ACTN4O43707 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ACTN4O43707 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.68■□□□□ 0.58
ACTN4O43707 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTN4O43707 MRPL20P1-201ENST00000400819 433 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ACTN4O43707 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTN4O43707 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.68■□□□□ 0.58
ACTN4O43707 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTN4O43707 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 RN7SL510P-201ENST00000581311 263 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.68■□□□□ 0.58
ACTN4O43707 AC104692.2-201ENST00000603054 253 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 MIR7706-201ENST00000613747 67 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 AC010654.1-201ENST00000615722 808 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 AC005593.1-201ENST00000624894 515 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 PGM5P2-202ENST00000637225 1043 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.68■□□□□ 0.58
ACTN4O43707 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
ACTN4O43707 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ACTN4O43707 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ACTN4O43707 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ACTN4O43707 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTN4O43707 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTN4O43707 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ACTN4O43707 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.67■□□□□ 0.58
ACTN4O43707 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.67■□□□□ 0.58
ACTN4O43707 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTN4O43707 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
ACTN4O43707 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms