Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 AC007950.2-201ENST00000615045 2347 ntBASIC16.63■□□□□ 0.25
PHGDHO43175 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.63■□□□□ 0.25
PHGDHO43175 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 SLC25A6P2-201ENST00000497974 877 ntBASIC16.63■□□□□ 0.25
PHGDHO43175 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.63■□□□□ 0.25
PHGDHO43175 AF238378.1-201ENST00000526806 358 ntBASIC16.63■□□□□ 0.25
PHGDHO43175 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 MIR4492-201ENST00000581627 80 ntBASIC16.63■□□□□ 0.25
PHGDHO43175 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PHGDHO43175 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.63■□□□□ 0.25
PHGDHO43175 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PHGDHO43175 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.63■□□□□ 0.25
PHGDHO43175 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHGDHO43175 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.63■□□□□ 0.25
PHGDHO43175 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PHGDHO43175 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.62■□□□□ 0.25
PHGDHO43175 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 AL031731.1-201ENST00000642131 2094 ntBASIC16.62■□□□□ 0.25
PHGDHO43175 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.62■□□□□ 0.25
PHGDHO43175 SCARNA2-201ENST00000458748 420 ntBASIC16.62■□□□□ 0.25
PHGDHO43175 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.62■□□□□ 0.25
PHGDHO43175 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.62■□□□□ 0.25
PHGDHO43175 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.62■□□□□ 0.25
PHGDHO43175 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PHGDHO43175 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.62■□□□□ 0.25
PHGDHO43175 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PHGDHO43175 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.62■□□□□ 0.25
PHGDHO43175 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.62■□□□□ 0.25
PHGDHO43175 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.62■□□□□ 0.25
PHGDHO43175 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PHGDHO43175 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PHGDHO43175 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.62■□□□□ 0.25
PHGDHO43175 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.62■□□□□ 0.25
PHGDHO43175 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.62■□□□□ 0.25
PHGDHO43175 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.62■□□□□ 0.25
PHGDHO43175 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PHGDHO43175 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHGDHO43175 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHGDHO43175 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHGDHO43175 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PHGDHO43175 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHGDHO43175 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PHGDHO43175 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.61■□□□□ 0.25
PHGDHO43175 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHGDHO43175 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.61■□□□□ 0.25
PHGDHO43175 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.61■□□□□ 0.25
PHGDHO43175 MTHFR-217ENST00000641820 1569 ntBASIC16.61■□□□□ 0.25
PHGDHO43175 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHGDHO43175 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms