Protein–RNA interactions for Protein: O43172

PRPF4, U4/U6 small nuclear ribonucleoprotein Prp4, humanhuman

Known RBP eCLIP

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4O43172 LMBR1L-214ENST00000550137 529 ntTSL 416.8■□□□□ 0.282e-6■□□□□ 11
PRPF4O43172 LMBR1L-210ENST00000549296 560 ntTSL 516.51■□□□□ 0.232e-6■□□□□ 11
PRPF4O43172 LMBR1L-225ENST00000552153 549 ntTSL 416.06■□□□□ 0.162e-6■□□□□ 11
PRPF4O43172 LMBR1L-216ENST00000550867 2800 ntTSL 1 (best)14.42□□□□□ -0.12e-6■□□□□ 11
PRPF4O43172 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.242e-6■□□□□ 11
PRPF4O43172 LMBR1L-230ENST00000553204 582 ntTSL 312.17□□□□□ -0.462e-6■□□□□ 11
PRPF4O43172 HLF-207ENST00000573422 493 ntTSL 410.85□□□□□ -0.674e-15■□□□□ 11
PRPF4O43172 LMBR1L-223ENST00000551854 535 ntTSL 49.51□□□□□ -0.892e-6■□□□□ 11
PRPF4O43172 LMBR1L-219ENST00000551169 771 ntTSL 59.37□□□□□ -0.912e-6■□□□□ 11
PRPF4O43172 HLF-206ENST00000573020 414 ntTSL 48.68□□□□□ -1.024e-15■□□□□ 11
PRPF4O43172 LMBR1L-222ENST00000551782 567 ntTSL 48.6□□□□□ -1.032e-6■□□□□ 11
PRPF4O43172 LMBR1L-215ENST00000550815 541 ntTSL 44.8□□□□□ -1.642e-6■□□□□ 11
PRPF4O43172 HLF-211ENST00000575868 558 ntTSL 44.34□□□□□ -1.714e-15■□□□□ 11
PRPF4O43172 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.22e-10■□□□□ 11
PRPF4O43172 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.192e-10■□□□□ 11
PRPF4O43172 UQCRC1-202ENST00000412343 778 ntTSL 320.62■□□□□ 0.891e-11■□□□□ 11
PRPF4O43172 UQCRC1-206ENST00000467690 931 ntTSL 219■□□□□ 0.631e-11■□□□□ 11
PRPF4O43172 UQCRC1-205ENST00000463708 739 ntTSL 312.61□□□□□ -0.391e-11■□□□□ 11
PRPF4O43172 SPPL2B-208ENST00000612623 495 ntTSL 515.86■□□□□ 0.132e-6■□□□□ 11
PRPF4O43172 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.174e-8■□□□□ 10.9
PRPF4O43172 SH3YL1-213ENST00000463865 1999 ntTSL 519.97■□□□□ 0.794e-8■□□□□ 10.9
PRPF4O43172 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.194e-8■□□□□ 10.9
PRPF4O43172 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC9.77□□□□□ -0.854e-8■□□□□ 10.9
PRPF4O43172 TMEM37-204ENST00000465296 820 ntTSL 315.62■□□□□ 0.096e-15■□□□□ 10.9
PRPF4O43172 FANCA-223ENST00000567284 479 ntTSL 39.13□□□□□ -0.952e-7■□□□□ 10.9
PRPF4O43172 FANCA-224ENST00000567510 461 ntTSL 36.44□□□□□ -1.382e-7■□□□□ 10.9
PRPF4O43172 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.087e-11■□□□□ 10.9
PRPF4O43172 FGG-204ENST00000405164 1539 ntTSL 5 BASIC7.23□□□□□ -1.257e-11■□□□□ 10.9
PRPF4O43172 FGG-209ENST00000465913 1573 ntTSL 26.87□□□□□ -1.317e-11■□□□□ 10.9
PRPF4O43172 FGG-212ENST00000492082 2031 ntTSL 56.35□□□□□ -1.397e-11■□□□□ 10.9
PRPF4O43172 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.89□□□□□ -1.477e-11■□□□□ 10.9
PRPF4O43172 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.8□□□□□ -1.487e-11■□□□□ 10.9
PRPF4O43172 DDX5-228ENST00000584279 676 ntTSL 319.23■□□□□ 0.671e-8■□□□□ 10.9
PRPF4O43172 DDX5-205ENST00000577922 996 ntTSL 519.23■□□□□ 0.671e-8■□□□□ 10.9
PRPF4O43172 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.311e-8■□□□□ 10.9
PRPF4O43172 DDX5-220ENST00000581806 576 ntTSL 415.36■□□□□ 0.051e-8■□□□□ 10.9
PRPF4O43172 DDX5-219ENST00000581697 580 ntTSL 515.02■□□□□ -01e-8■□□□□ 10.9
PRPF4O43172 DDX5-232ENST00000585111 1051 ntTSL 214.92□□□□□ -0.021e-8■□□□□ 10.9
PRPF4O43172 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.84□□□□□ -0.191e-8■□□□□ 10.9
PRPF4O43172 DDX5-207ENST00000578400 575 ntTSL 513.19□□□□□ -0.31e-8■□□□□ 10.9
PRPF4O43172 DDX5-218ENST00000581693 2156 ntTSL 511.97□□□□□ -0.491e-8■□□□□ 10.9
PRPF4O43172 DDX5-203ENST00000540698 2225 ntTSL 511.85□□□□□ -0.511e-8■□□□□ 10.9
PRPF4O43172 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC11.67□□□□□ -0.541e-8■□□□□ 10.9
PRPF4O43172 DDX5-233ENST00000585223 699 ntTSL 210.58□□□□□ -0.721e-8■□□□□ 10.9
PRPF4O43172 DDX5-231ENST00000585060 572 ntTSL 48.82□□□□□ -11e-8■□□□□ 10.9
PRPF4O43172 DDX5-215ENST00000581230 3558 ntTSL 28.71□□□□□ -1.021e-8■□□□□ 10.9
PRPF4O43172 TMEM94-208ENST00000578853 905 ntTSL 314.17□□□□□ -0.143e-9■□□□□ 10.9
PRPF4O43172 TMEM94-210ENST00000579241 986 ntTSL 214.01□□□□□ -0.173e-9■□□□□ 10.9
PRPF4O43172 TMEM94-216ENST00000580918 769 ntTSL 311.6□□□□□ -0.553e-9■□□□□ 10.9
PRPF4O43172 TMEM94-226ENST00000582843 570 ntTSL 49.92□□□□□ -0.823e-9■□□□□ 10.9
PRPF4O43172 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.92■□□□□ 0.621e-6■□□□□ 10.9
PRPF4O43172 MLXIPL-208ENST00000456640 706 ntTSL 516.35■□□□□ 0.212e-8■□□□□ 10.9
PRPF4O43172 AP1G2-224ENST00000556741 353 ntTSL 211.51□□□□□ -0.579e-10■□□□□ 10.9
PRPF4O43172 AP1G2-230ENST00000557162 561 ntTSL 49.83□□□□□ -0.849e-10■□□□□ 10.9
PRPF4O43172 AP1G2-215ENST00000554977 569 ntTSL 49.29□□□□□ -0.929e-10■□□□□ 10.9
PRPF4O43172 AP1G2-219ENST00000555789 318 ntTSL 39.29□□□□□ -0.929e-10■□□□□ 10.9
PRPF4O43172 AP1G2-221ENST00000555974 349 ntTSL 37.68□□□□□ -1.189e-10■□□□□ 10.9
PRPF4O43172 AC023509.1-201ENST00000547717 1571 ntTSL 2 BASIC11□□□□□ -0.652e-14■□□□□ 10.9
PRPF4O43172 PCBP2-217ENST00000550520 753 ntTSL 310.35□□□□□ -0.752e-14■□□□□ 10.9
PRPF4O43172 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.336e-7■□□□□ 10.9
PRPF4O43172 FAM213B-214ENST00000498083 464 ntAPPRIS ALT2 TSL 321.38■■□□□ 1.013e-8■□□□□ 10.9
PRPF4O43172 ACIN1-219ENST00000556052 746 ntTSL 213.86□□□□□ -0.195e-8■□□□□ 10.9
PRPF4O43172 ACIN1-216ENST00000555478 1017 ntTSL 513.22□□□□□ -0.295e-8■□□□□ 10.9
PRPF4O43172 ACIN1-209ENST00000553790 756 ntTSL 211.11□□□□□ -0.635e-8■□□□□ 10.9
PRPF4O43172 ACIN1-210ENST00000554680 888 ntTSL 210.14□□□□□ -0.795e-8■□□□□ 10.9
PRPF4O43172 ACIN1-218ENST00000555807 928 ntTSL 29.54□□□□□ -0.885e-8■□□□□ 10.9
PRPF4O43172 ACIN1-220ENST00000557039 727 ntTSL 39.25□□□□□ -0.935e-8■□□□□ 10.9
PRPF4O43172 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.217e-7■□□□□ 10.9
PRPF4O43172 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.217e-7■□□□□ 10.9
PRPF4O43172 AC087482.1-202ENST00000558071 903 ntTSL 5 BASIC10.94□□□□□ -0.664e-11■□□□□ 10.9
PRPF4O43172 TOMM20-201ENST00000366607 3387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.495e-11■□□□□ 10.9
PRPF4O43172 KLHDC10-202ENST00000463413 503 ntTSL 224.46■■□□□ 1.519e-8■□□□□ 10.9
PRPF4O43172 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.749e-8■□□□□ 10.9
PRPF4O43172 KLHDC10-203ENST00000468226 772 ntTSL 36.89□□□□□ -1.319e-8■□□□□ 10.9
PRPF4O43172 GREB1-207ENST00000432985 2052 ntTSL 1 (best)13.3□□□□□ -0.285e-7■□□□□ 10.9
PRPF4O43172 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.467e-8■□□□□ 10.9
PRPF4O43172 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.894e-7■□□□□ 10.9
PRPF4O43172 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.742e-7■□□□□ 10.9
PRPF4O43172 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.85□□□□□ -0.193e-6■□□□□ 10.9
PRPF4O43172 GAPDH-211ENST00000619601 1086 ntTSL 5 BASIC10.5□□□□□ -0.733e-6■□□□□ 10.9
PRPF4O43172 UBA2-210ENST00000607361 754 ntTSL 224.1■■□□□ 1.453e-9■□□□□ 10.9
PRPF4O43172 UBA2-203ENST00000586313 1458 ntTSL 220.38■□□□□ 0.853e-9■□□□□ 10.9
PRPF4O43172 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.123e-9■□□□□ 10.9
PRPF4O43172 UBA2-205ENST00000590048 847 ntTSL 314.22□□□□□ -0.133e-9■□□□□ 10.9
PRPF4O43172 UBA2-209ENST00000592841 344 ntTSL 23.14□□□□□ -1.913e-9■□□□□ 10.9
PRPF4O43172 SPATS2-212ENST00000549298 643 ntTSL 322.73■■□□□ 1.231e-6■□□□□ 10.9
PRPF4O43172 SPATS2-214ENST00000549412 2781 ntTSL 221.9■■□□□ 1.11e-6■□□□□ 10.9
PRPF4O43172 SPATS2-211ENST00000549179 570 ntTSL 421.77■■□□□ 1.081e-6■□□□□ 10.9
PRPF4O43172 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.121e-6■□□□□ 10.9
PRPF4O43172 SPATS2-216ENST00000550643 527 ntTSL 414.2□□□□□ -0.141e-6■□□□□ 10.9
PRPF4O43172 SPATS2-217ENST00000550997 675 ntTSL 514.15□□□□□ -0.141e-6■□□□□ 10.9
PRPF4O43172 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.221e-6■□□□□ 10.9
PRPF4O43172 SPATS2-213ENST00000549375 1061 ntTSL 212.41□□□□□ -0.421e-6■□□□□ 10.9
PRPF4O43172 SPATS2-207ENST00000548710 558 ntTSL 411.65□□□□□ -0.541e-6■□□□□ 10.9
PRPF4O43172 SPATS2-204ENST00000548377 552 ntTSL 48.02□□□□□ -1.131e-6■□□□□ 10.9
PRPF4O43172 SPATS2-206ENST00000548654 546 ntTSL 33.8□□□□□ -1.81e-6■□□□□ 10.9
PRPF4O43172 SPATS2-215ENST00000549538 570 ntTSL 43.3□□□□□ -1.881e-6■□□□□ 10.9
PRPF4O43172 MIR6787-201ENST00000616675 61 ntBASIC13.95□□□□□ -0.181e-11■□□□□ 10.8
PRPF4O43172 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.53□□□□□ -1.22e-14■□□□□ 10.8
PRPF4O43172 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC12.2□□□□□ -0.461e-8■□□□□ 10.8
Retrieved 100 of 20,551 protein–RNA pairs in 120.1 ms