Protein–RNA interactions for Protein: O15537

RS1, Retinoschisin, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RS1O15537 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.06□□□□□ -0.48
RS1O15537 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RS1O15537 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.06□□□□□ -0.48
RS1O15537 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RS1O15537 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RS1O15537 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RS1O15537 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RS1O15537 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.06□□□□□ -0.48
RS1O15537 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RS1O15537 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.05□□□□□ -0.48
RS1O15537 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.05□□□□□ -0.48
RS1O15537 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.05□□□□□ -0.48
RS1O15537 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
RS1O15537 SART3-203ENST00000546611 1184 ntBASIC12.05□□□□□ -0.48
RS1O15537 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.05□□□□□ -0.48
RS1O15537 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 MTDHP4-201ENST00000600287 670 ntBASIC12.05□□□□□ -0.48
RS1O15537 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
RS1O15537 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RS1O15537 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.05□□□□□ -0.48
RS1O15537 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.05□□□□□ -0.48
RS1O15537 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
RS1O15537 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.05□□□□□ -0.48
RS1O15537 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RS1O15537 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RS1O15537 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RS1O15537 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.04□□□□□ -0.48
RS1O15537 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.04□□□□□ -0.48
RS1O15537 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.04□□□□□ -0.48
RS1O15537 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RS1O15537 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.04□□□□□ -0.48
RS1O15537 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
RS1O15537 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.04□□□□□ -0.48
RS1O15537 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.04□□□□□ -0.48
RS1O15537 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.04□□□□□ -0.48
RS1O15537 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.04□□□□□ -0.48
RS1O15537 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RS1O15537 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.04□□□□□ -0.48
RS1O15537 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.04□□□□□ -0.48
RS1O15537 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.04□□□□□ -0.48
RS1O15537 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RS1O15537 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.04□□□□□ -0.48
RS1O15537 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RS1O15537 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.04□□□□□ -0.48
RS1O15537 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.04□□□□□ -0.48
RS1O15537 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.03□□□□□ -0.48
RS1O15537 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RS1O15537 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RS1O15537 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RS1O15537 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.03□□□□□ -0.48
RS1O15537 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RS1O15537 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RS1O15537 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RS1O15537 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RS1O15537 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms