Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM38O00635 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM38O00635 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM38O00635 AL139400.1-201ENST00000366220 510 ntBASIC16.81■□□□□ 0.28
TRIM38O00635 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM38O00635 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM38O00635 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM38O00635 AP000344.2-201ENST00000512987 629 ntBASIC16.81■□□□□ 0.28
TRIM38O00635 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM38O00635 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM38O00635 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM38O00635 MIR3197-201ENST00000582241 73 ntBASIC16.81■□□□□ 0.28
TRIM38O00635 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM38O00635 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TRIM38O00635 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM38O00635 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
TRIM38O00635 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM38O00635 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM38O00635 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRIM38O00635 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM38O00635 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM38O00635 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM38O00635 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM38O00635 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 TSEN15P1-201ENST00000423257 515 ntBASIC16.8■□□□□ 0.28
TRIM38O00635 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM38O00635 FAM185BP-201ENST00000443595 716 ntBASIC16.8■□□□□ 0.28
TRIM38O00635 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 AL513210.1-201ENST00000629608 234 ntBASIC16.8■□□□□ 0.28
TRIM38O00635 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM38O00635 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRIM38O00635 AL391005.1-201ENST00000623953 2435 ntBASIC16.8■□□□□ 0.28
TRIM38O00635 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM38O00635 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM38O00635 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM38O00635 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM38O00635 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM38O00635 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM38O00635 AC011270.2-201ENST00000624293 2550 ntBASIC16.8■□□□□ 0.28
TRIM38O00635 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM38O00635 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM38O00635 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM38O00635 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM38O00635 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM38O00635 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM38O00635 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRIM38O00635 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM38O00635 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM38O00635 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM38O00635 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM38O00635 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM38O00635 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM38O00635 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM38O00635 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM38O00635 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM38O00635 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM38O00635 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM38O00635 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM38O00635 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms