Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.76■□□□□ 0.11
CLIC1O00299 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.76■□□□□ 0.11
CLIC1O00299 AC139887.3-201ENST00000568585 713 ntBASIC15.76■□□□□ 0.11
CLIC1O00299 MTDHP3-201ENST00000594186 672 ntBASIC15.76■□□□□ 0.11
CLIC1O00299 AL732292.2-201ENST00000609649 430 ntBASIC15.76■□□□□ 0.11
CLIC1O00299 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 GGT4P-201ENST00000623672 1708 ntBASIC15.76■□□□□ 0.11
CLIC1O00299 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.76■□□□□ 0.11
CLIC1O00299 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.76■□□□□ 0.11
CLIC1O00299 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.76■□□□□ 0.11
CLIC1O00299 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLIC1O00299 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLIC1O00299 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.76■□□□□ 0.11
CLIC1O00299 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.75■□□□□ 0.11
CLIC1O00299 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.75■□□□□ 0.11
CLIC1O00299 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
CLIC1O00299 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.75■□□□□ 0.11
CLIC1O00299 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CLIC1O00299 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.75■□□□□ 0.11
CLIC1O00299 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.75■□□□□ 0.11
CLIC1O00299 REXO1L3P-201ENST00000622202 1288 ntBASIC15.75■□□□□ 0.11
CLIC1O00299 AF228730.7-201ENST00000641842 219 ntBASIC15.75■□□□□ 0.11
CLIC1O00299 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLIC1O00299 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLIC1O00299 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLIC1O00299 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLIC1O00299 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CLIC1O00299 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLIC1O00299 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.74■□□□□ 0.11
CLIC1O00299 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.74■□□□□ 0.11
CLIC1O00299 AC131009.4-201ENST00000624048 1740 ntBASIC15.74■□□□□ 0.11
CLIC1O00299 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLIC1O00299 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.74■□□□□ 0.11
CLIC1O00299 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.74■□□□□ 0.11
CLIC1O00299 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.74■□□□□ 0.11
CLIC1O00299 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.74■□□□□ 0.11
CLIC1O00299 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.74■□□□□ 0.11
CLIC1O00299 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.74■□□□□ 0.11
CLIC1O00299 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.74■□□□□ 0.11
CLIC1O00299 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CLIC1O00299 AC093458.2-201ENST00000623150 629 ntBASIC15.74■□□□□ 0.11
CLIC1O00299 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CLIC1O00299 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLIC1O00299 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.74■□□□□ 0.11
CLIC1O00299 AC024909.3-201ENST00000611513 2257 ntBASIC15.74■□□□□ 0.11
CLIC1O00299 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLIC1O00299 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms