Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 DOC2GP-202ENST00000514950 1163 ntBASIC16.24■□□□□ 0.19
C4orf47A7E2U8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 AC092552.1-201ENST00000547243 906 ntBASIC16.24■□□□□ 0.19
C4orf47A7E2U8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
C4orf47A7E2U8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 BTBD7P1-201ENST00000447253 1453 ntBASIC16.23■□□□□ 0.19
C4orf47A7E2U8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 MIR4525-201ENST00000580000 75 ntBASIC16.23■□□□□ 0.19
C4orf47A7E2U8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 AC021097.1-201ENST00000607902 574 ntBASIC16.23■□□□□ 0.19
C4orf47A7E2U8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 AC007431.3-201ENST00000623221 587 ntBASIC16.23■□□□□ 0.19
C4orf47A7E2U8 AL033527.4-201ENST00000641026 673 ntBASIC16.23■□□□□ 0.19
C4orf47A7E2U8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
C4orf47A7E2U8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AC131009.4-201ENST00000624048 1740 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 PP12613-201ENST00000424958 2230 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 TTTY23B-201ENST00000442790 549 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AC093004.1-201ENST00000508850 424 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 FAM8A2P-201ENST00000528813 1142 ntBASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.22■□□□□ 0.19
C4orf47A7E2U8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms