Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 BANF1P1-201ENST00000553684 263 ntBASIC14.54□□□□□ -0.08
MBD3L3A6NE82 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 AC008761.3-201ENST00000624803 892 ntBASIC14.54□□□□□ -0.08
MBD3L3A6NE82 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 AL589702.1-201ENST00000641229 1509 ntBASIC14.54□□□□□ -0.08
MBD3L3A6NE82 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 AP001094.4-201ENST00000579008 2176 ntBASIC14.54□□□□□ -0.08
MBD3L3A6NE82 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.53□□□□□ -0.08
MBD3L3A6NE82 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 MTND6P24-201ENST00000440466 518 ntBASIC14.53□□□□□ -0.08
MBD3L3A6NE82 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.53□□□□□ -0.08
MBD3L3A6NE82 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 AC190387.1-201ENST00000551683 408 ntBASIC14.53□□□□□ -0.08
MBD3L3A6NE82 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 LINC02560-201ENST00000596379 459 ntBASIC14.53□□□□□ -0.08
MBD3L3A6NE82 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.53□□□□□ -0.08
MBD3L3A6NE82 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MBD3L3A6NE82 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 AC022144.1-201ENST00000602255 1580 ntBASIC14.52□□□□□ -0.08
MBD3L3A6NE82 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MBD3L3A6NE82 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
MBD3L3A6NE82 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MBD3L3A6NE82 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MBD3L3A6NE82 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MBD3L3A6NE82 MRPS18AP1-201ENST00000414458 589 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms