Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 AC211429.1-201ENST00000415277 523 ntBASIC14.55□□□□□ -0.08
SHISA3A0PJX4 LINC00982-205ENST00000420957 435 ntBASIC14.55□□□□□ -0.08
SHISA3A0PJX4 BX664615.1-201ENST00000443558 458 ntBASIC14.55□□□□□ -0.08
SHISA3A0PJX4 SIGLEC30P-201ENST00000455569 941 ntBASIC14.55□□□□□ -0.08
SHISA3A0PJX4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 AC006486.2-201ENST00000624246 2199 ntBASIC14.55□□□□□ -0.08
SHISA3A0PJX4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 AC087499.1-201ENST00000418141 1075 ntBASIC14.54□□□□□ -0.08
SHISA3A0PJX4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 AC133561.5-201ENST00000635547 218 ntBASIC14.54□□□□□ -0.08
SHISA3A0PJX4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 PCGF3-213ENST00000620529 1899 ntBASIC14.54□□□□□ -0.08
SHISA3A0PJX4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHISA3A0PJX4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 FAM45BP-202ENST00000592932 1624 ntBASIC14.53□□□□□ -0.08
SHISA3A0PJX4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 KRT8P39-201ENST00000396270 1433 ntBASIC14.53□□□□□ -0.08
SHISA3A0PJX4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 AL020989.1-201ENST00000422979 469 ntBASIC14.53□□□□□ -0.08
SHISA3A0PJX4 TSPY5P-201ENST00000426936 936 ntBASIC14.53□□□□□ -0.08
SHISA3A0PJX4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 HOMER2P1-201ENST00000455653 964 ntBASIC14.53□□□□□ -0.08
SHISA3A0PJX4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 MIR4492-201ENST00000581627 80 ntBASIC14.53□□□□□ -0.08
SHISA3A0PJX4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 IGHV3-41-201ENST00000613121 348 ntBASIC14.53□□□□□ -0.08
SHISA3A0PJX4 AP003680.1-201ENST00000598970 3660 ntBASIC14.53□□□□□ -0.08
SHISA3A0PJX4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms