Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 AL671710.1-201ENST00000610245 2349 ntBASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 LINC00982-205ENST00000420957 435 ntBASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 NTF6B-201ENST00000591913 560 ntBASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 INTS4P1-201ENST00000438455 1935 ntBASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 AL603832.2-201ENST00000566195 2125 ntBASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV5A0A0B4J249 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 RCN1P2-201ENST00000398357 915 ntBASIC13□□□□□ -0.33
TRAV5A0A0B4J249 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 MINOS1P3-201ENST00000457048 203 ntBASIC13□□□□□ -0.33
TRAV5A0A0B4J249 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13□□□□□ -0.33
TRAV5A0A0B4J249 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms