Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 KRT18P27-201ENST00000427733 1299 ntBASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 SAPCD2P3-201ENST00000455031 850 ntBASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 POU5F1P6-201ENST00000466990 990 ntBASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 GGTLC5P-201ENST00000617623 998 ntBASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA3Q9Y5H8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 AC073621.1-201ENST00000392730 636 ntBASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 RPS15P9-201ENST00000494093 319 ntBASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 AC087641.1-201ENST00000557561 1021 ntBASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 AC129492.6-201ENST00000611383 1305 ntBASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA3Q9Y5H8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 PAUPAR-201ENST00000630360 2965 ntBASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 AC005412.3-201ENST00000580309 715 ntBASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 AC010654.1-201ENST00000615722 808 ntBASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 AC011270.2-201ENST00000624293 2550 ntBASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms