Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 AC109635.5-201ENST00000533593 962 ntBASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 AC099522.2-201ENST00000607001 744 ntBASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGC4Q9Y5F7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 AL031731.1-201ENST00000642131 2094 ntBASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 HLA-J-202ENST00000469281 1241 ntBASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 MIR3909-201ENST00000579518 119 ntBASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 AC021097.1-201ENST00000607902 574 ntBASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 PCDHA14-201ENST00000506751 2298 ntBASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGC4Q9Y5F7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 MKNK2P1-201ENST00000437526 628 ntBASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 MIR4469-201ENST00000583919 79 ntBASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 AC055717.3-201ENST00000622967 595 ntBASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms