Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 SPTLC1P1-201ENST00000447199 261 ntBASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 AC009477.1-201ENST00000452936 217 ntBASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 AL596325.1-201ENST00000563991 1082 ntBASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB7Q9Y5E2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB7Q9Y5E2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
PCDHB7Q9Y5E2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 NME2P1-201ENST00000426182 414 ntBASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 RN7SL692P-201ENST00000464677 288 ntBASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 AC009407.1-201ENST00000568958 598 ntBASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.83■□□□□ 0.44
PCDHB7Q9Y5E2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 SNX33P1-201ENST00000592116 1762 ntBASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms