Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 GPR53P-205ENST00000457298 1084 ntBASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 AC099568.2-201ENST00000609194 695 ntBASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 AL589702.1-201ENST00000641229 1509 ntBASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 AL512652.2-201ENST00000625156 1716 ntBASIC17.11■□□□□ 0.33
MTCL1Q9Y4B5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 AC060834.1-201ENST00000443027 2032 ntBASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 AL359881.2-201ENST00000602973 570 ntBASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 AC141586.5-201ENST00000624546 2050 ntBASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MTCL1Q9Y4B5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 SNX29P1-201ENST00000548357 1007 ntBASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 AC008735.3-201ENST00000596646 500 ntBASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTCL1Q9Y4B5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms