Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 AL031432.2-201ENST00000566714 459 ntBASIC16.78■□□□□ 0.28
PKP3Q9Y446 AL928711.1-201ENST00000570165 459 ntBASIC16.78■□□□□ 0.28
PKP3Q9Y446 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.78■□□□□ 0.28
PKP3Q9Y446 FAM197Y3-203ENST00000618346 717 ntBASIC16.78■□□□□ 0.28
PKP3Q9Y446 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PKP3Q9Y446 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKP3Q9Y446 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 RHOQP3-201ENST00000437982 621 ntBASIC16.77■□□□□ 0.28
PKP3Q9Y446 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 AC140113.2-201ENST00000604370 208 ntBASIC16.77■□□□□ 0.28
PKP3Q9Y446 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.77■□□□□ 0.28
PKP3Q9Y446 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PKP3Q9Y446 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PKP3Q9Y446 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PKP3Q9Y446 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PKP3Q9Y446 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PKP3Q9Y446 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.77■□□□□ 0.27
PKP3Q9Y446 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PKP3Q9Y446 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PKP3Q9Y446 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.77■□□□□ 0.27
PKP3Q9Y446 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 HLA-A-202ENST00000376806 1854 ntBASIC16.76■□□□□ 0.27
PKP3Q9Y446 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 KRT18P3-201ENST00000451602 1288 ntBASIC16.76■□□□□ 0.27
PKP3Q9Y446 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.76■□□□□ 0.27
PKP3Q9Y446 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 KRT8P39-201ENST00000396270 1433 ntBASIC16.76■□□□□ 0.27
PKP3Q9Y446 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PKP3Q9Y446 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PKP3Q9Y446 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PKP3Q9Y446 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PKP3Q9Y446 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms