Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 LINC00528-201ENST00000600723 2160 ntBASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 CA15P1-201ENST00000481698 905 ntBASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 AC002558.1-201ENST00000488906 803 ntBASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 AC116562.4-202ENST00000641738 218 ntBASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 SSR4P1-203ENST00000599569 2260 ntBASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH1Q9Y2L9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 GGT4P-201ENST00000623672 1708 ntBASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 PRAL-201ENST00000624952 3286 ntBASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 AC113347.1-201ENST00000413321 391 ntBASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 AC104390.1-201ENST00000555663 520 ntBASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 TUBB8P12-201ENST00000308911 1335 ntBASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 TUBB7P-202ENST00000428444 1305 ntBASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 TUBB8P7-204ENST00000567960 1332 ntBASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 LINC01101-201ENST00000622953 1884 ntBASIC15.91■□□□□ 0.14
LRCH1Q9Y2L9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 AC007191.1-201ENST00000623179 2995 ntBASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms