Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 HTR5BP-201ENST00000430851 1154 ntBASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 FAM185BP-201ENST00000443595 716 ntBASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 DNAJB3-201ENST00000446806 729 ntBASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 ACTL9-202ENST00000612068 1252 ntBASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 REXO1L3P-201ENST00000622202 1288 ntBASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 FLJ16779-201ENST00000612722 7638 ntBASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 AC002347.1-201ENST00000569543 541 ntBASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 AC023141.13-201ENST00000604991 943 ntBASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 AC007064.4-201ENST00000637740 555 ntBASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 C8orf49-201ENST00000525043 1968 ntBASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 AC018695.7-201ENST00000624587 2492 ntBASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RPH3AQ9Y2J0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPH3AQ9Y2J0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RPH3AQ9Y2J0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 KRT19P2-202ENST00000557173 1012 ntBASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms