Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 IGHV3-65-201ENST00000523210 341 ntBASIC15.13■□□□□ 0.01
RCE1Q9Y256 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 AC103702.1-201ENST00000548801 2630 ntBASIC15.13■□□□□ 0.01
RCE1Q9Y256 DUX4L17-201ENST00000557360 1267 ntBASIC15.13■□□□□ 0.01
RCE1Q9Y256 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 HLA-A-201ENST00000376802 1334 ntBASIC15.13■□□□□ 0.01
RCE1Q9Y256 AL513477.1-201ENST00000602865 2407 ntBASIC15.13■□□□□ 0.01
RCE1Q9Y256 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 AC068418.2-201ENST00000577309 3703 ntBASIC15.12■□□□□ 0.01
RCE1Q9Y256 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 AC087163.2-201ENST00000457299 853 ntBASIC15.12■□□□□ 0.01
RCE1Q9Y256 AP002490.2-201ENST00000524791 560 ntBASIC15.12■□□□□ 0.01
RCE1Q9Y256 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 AL121894.2-201ENST00000602977 491 ntBASIC15.12■□□□□ 0.01
RCE1Q9Y256 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
RCE1Q9Y256 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RCE1Q9Y256 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCE1Q9Y256 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCE1Q9Y256 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCE1Q9Y256 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCE1Q9Y256 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCE1Q9Y256 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RCE1Q9Y256 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCE1Q9Y256 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RCE1Q9Y256 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 AC092910.1-201ENST00000482027 1129 ntBASIC15.11■□□□□ 0.01
RCE1Q9Y256 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RCE1Q9Y256 AL049840.3-201ENST00000602669 611 ntBASIC15.11■□□□□ 0.01
RCE1Q9Y256 AC117500.6-201ENST00000624871 588 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms