Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC138969.3-201ENST00000546612 1459 ntBASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 AC138932.2-201ENST00000548268 1459 ntBASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 AC126755.4-201ENST00000549796 1459 ntBASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 GNAQP1-201ENST00000444815 1067 ntBASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 ACA64.2-201ENST00000459014 129 ntBASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 AC004461.2-201ENST00000629517 803 ntBASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 AL109936.8-201ENST00000641772 604 ntBASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 AC007541.1-201ENST00000570282 1469 ntBASIC24.4■■□□□ 1.5
SHANK2Q9UPX8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 SPDYE19P-201ENST00000338590 713 ntBASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 AL589987.1-201ENST00000453380 819 ntBASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 Six3os1_5.1-201ENST00000611000 271 ntBASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SHANK2Q9UPX8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC24.39■■□□□ 1.49
SHANK2Q9UPX8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC24.39■■□□□ 1.49
SHANK2Q9UPX8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHANK2Q9UPX8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC24.39■■□□□ 1.49
SHANK2Q9UPX8 AC005915.1-201ENST00000624912 2018 ntBASIC24.39■■□□□ 1.49
SHANK2Q9UPX8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHANK2Q9UPX8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC24.39■■□□□ 1.49
SHANK2Q9UPX8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 AC105020.1-201ENST00000435356 2205 ntBASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHANK2Q9UPX8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 AL136982.4-201ENST00000437689 1740 ntBASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 LINC01144-201ENST00000626198 1710 ntBASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 AC098614.1-201ENST00000368528 745 ntBASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 DGCR5-201ENST00000399539 862 ntBASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC24.37■■□□□ 1.49
SHANK2Q9UPX8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms