Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 HCG4-201ENST00000418983 998 ntBASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 RPL13AP23-201ENST00000480739 586 ntBASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 CXCL1P1-201ENST00000502804 216 ntBASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 BX640515.1-201ENST00000617215 977 ntBASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 AP001350.2-201ENST00000625104 1094 ntBASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 FER1L4-210ENST00000615531 5998 ntBASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 AC006538.1-201ENST00000567905 1585 ntBASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 ALOX12P2-203ENST00000570921 1945 ntBASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHRNA9Q9UGM1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 AC079328.2-201ENST00000561241 3354 ntBASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 SLC22A20-204ENST00000530038 1673 ntBASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 PMS2P1-201ENST00000431037 1228 ntBASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 FAM185BP-201ENST00000443595 716 ntBASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 MIR4492-201ENST00000581627 80 ntBASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 AC120114.3-201ENST00000611923 658 ntBASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 AL139011.1-202ENST00000642063 584 ntBASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRNA9Q9UGM1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms