Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 PFN2-202ENST00000423691 911 ntTSL 2 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 IDS-203ENST00000428056 1213 ntTSL 2 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 AC145423.3-201ENST00000615987 467 ntBASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 NKAIN1P1-201ENST00000435754 582 ntBASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 AC098935.1-201ENST00000446057 611 ntBASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RIMBP3Q9UFD9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 MIR1202-201ENST00000408529 83 ntBASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 AL590640.2-201ENST00000457038 527 ntBASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 WT1-AS_6.1-201ENST00000614919 121 ntBASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 AL589702.1-201ENST00000641229 1509 ntBASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 RPSAP31-201ENST00000416648 895 ntBASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 RN7SL8P-201ENST00000461771 266 ntBASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 COX6A1P2-201ENST00000620597 330 ntBASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC25.85■■□□□ 1.73
RIMBP3Q9UFD9 LINC00304-203ENST00000565008 1864 ntBASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 VDAC1P7-201ENST00000462417 847 ntBASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 RPL13AP25-201ENST00000484130 612 ntBASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC25.84■■□□□ 1.73
RIMBP3Q9UFD9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 FO393414.2-201ENST00000405153 598 ntBASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 AC010234.1-201ENST00000494599 870 ntBASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RIMBP3Q9UFD9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms