Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 RN7SL589P-201ENST00000481268 310 ntBASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 AC005412.3-201ENST00000580309 715 ntBASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HDAC6Q9UBN7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HDAC6Q9UBN7 AL035633.1-201ENST00000406139 838 ntBASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 AC069335.1-201ENST00000489972 472 ntBASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 DUX4L27-201ENST00000554796 1261 ntBASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 AC015911.4-201ENST00000588022 1070 ntBASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 AL390955.2-201ENST00000603032 514 ntBASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 AC012569.1-201ENST00000591191 1524 ntBASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HDAC6Q9UBN7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 AKAP8P1-201ENST00000434743 1349 ntBASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 KRT18P32-201ENST00000424695 1287 ntBASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.82■□□□□ 0.6
HDAC6Q9UBN7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms