Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 AP002469.2-201ENST00000531724 424 ntBASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 AP001005.1-201ENST00000571755 1248 ntBASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00474Q9P2X8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 AC067930.6-201ENST00000623257 4947 ntBASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00474Q9P2X8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 PCDHB17P-201ENST00000539533 2393 ntBASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 AC018712.1-201ENST00000455767 687 ntBASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 TP73-AS1-207ENST00000624167 988 ntBASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00474Q9P2X8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 AC004817.3-201ENST00000602957 2129 ntBASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00474Q9P2X8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms