Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1R1Q9NWW0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 AL391256.1-201ENST00000443260 1855 ntBASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 GNAQP1-201ENST00000444815 1067 ntBASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 AL132655.2-201ENST00000596276 594 ntBASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1R1Q9NWW0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 AL512652.2-201ENST00000625156 1716 ntBASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 AC007541.1-201ENST00000570282 1469 ntBASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 AL645728.1-201ENST00000366221 2101 ntBASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 CR383656.12-201ENST00000549567 513 ntBASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.18■□□□□ 0.34
HCFC1R1Q9NWW0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HCFC1R1Q9NWW0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms