Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 AC073389.1-201ENST00000595595 795 ntBASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 ME2P1-201ENST00000426028 1970 ntBASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNMB3Q9NPA1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 DNAJB3-202ENST00000449667 1266 ntBASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 AC093520.2-201ENST00000561830 333 ntBASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 AL691403.2-201ENST00000618460 490 ntBASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 AC008267.7-201ENST00000624570 1194 ntBASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 AC084121.4-201ENST00000641598 221 ntBASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 AF228730.8-201ENST00000642140 221 ntBASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 LINC01144-201ENST00000626198 1710 ntBASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNMB3Q9NPA1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNMB3Q9NPA1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNMB3Q9NPA1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KCNMB3Q9NPA1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
KCNMB3Q9NPA1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KCNMB3Q9NPA1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
KCNMB3Q9NPA1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
KCNMB3Q9NPA1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 AC069335.1-201ENST00000489972 472 ntBASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 FOXO1B-201ENST00000504678 1527 ntBASIC18.64■□□□□ 0.57
KCNMB3Q9NPA1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms